logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002438_2|CGC19

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002438_03973
Cytidylate kinase
TC 1300526 1301173 - 2.A.115.2.14
MGYG000002438_03974
Sensor histidine kinase RcsC
STP 1301319 1303859 + GAF| HisKA| HATPase_c| Response_reg
MGYG000002438_03975
hypothetical protein
CAZyme 1303895 1306171 - GH92
MGYG000002438_03976
hypothetical protein
CAZyme 1306290 1308560 - GH92
MGYG000002438_03977
hypothetical protein
CAZyme 1308570 1310924 - GH92
MGYG000002438_03978
TonB-dependent receptor SusC
TC 1311283 1314429 + 1.B.14.6.1
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is host glycan

Protein ID eCAMI subfam CAZyme substrate
MGYG000002438_03975 GH92_e17|3.2.1.- hostglycan
MGYG000002438_03976 GH92_e0|3.2.1.114|3.2.1.- hostglycan
MGYG000002438_03977 GH92_e8|3.2.1.113|3.2.1.- hostglycan

Substrate predicted by dbCAN-PUL is mucin download this fig


Genomic location